Albidiferax sp. OV413

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Rhodoferax

Description

Albidiferax sp. OV413 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which suggests it has the capability for motility. This species contains a single replicon, indicating it has a streamlined genetic structure that may contribute to its adaptability in various environments. The genomic data for Albidiferax sp. OV413 is available under the accession FNJA00000000.1, which facilitates further research and exploration into its biological properties. The morphological characteristics of Albidiferax sp. OV413 align with those of other members of the Albidiferax genus, known for their ecological roles in particular environments. While specific ecological interactions of Albidiferax sp. OV413 are not detailed, the motility conferred by its flagella may enable it to navigate through diverse habitats, potentially allowing it to exploit various ecological niches. This trait could be particularly beneficial in competitive environments where movement toward nutrient sources or away from harmful conditions is crucial for survival. Overall, the traits of Albidiferax sp. OV413 suggest a bacterium well-adapted for a dynamic ecological role, possibly contributing to biogeochemical processes in its environment. Understanding this organism further may provide insights into its ecological significance and its interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusRhodoferax
SpeciesRhodoferax sp. OV413
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Albidiferax sp. OV413
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Albidiferax sp. OV413 genome assembly, contig: Ga0066711_123,

Gene Summary

Adenine Count

1064911 bp

Thymine Count

1038556 bp

Guanine Count

1787662 bp

Cytosine Count

1845127 bp

Genome Length

5736266 bp

Protein-coding Genes

5155 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methyl-accepting chemotaxis sensory transducerSAMN05216303_102516Not AvailablePositive2145768 - 214731854426.1
trna (5-methylaminomethyl-2-thiouridylate)-methyltransferaseSAMN05216303_102517Not AvailableNegative2147416 - 214853740817.3
dna-binding transcriptional regulator, lysr familySAMN05216303_102518Not AvailableNegative2148667 - 214958733394.5
tripartite-type tricarboxylate transporter, receptor component tctcSAMN05216303_102519Not AvailablePositive2149723 - 215072434189.4
2-oxo-hept-3-ene-1,7-dioate hydrataseSAMN05216303_102520Not AvailablePositive2150756 - 215155929008.1
4-hydroxy-2-oxoheptanedioate aldolaseSAMN05216303_102521Not AvailablePositive2151571 - 215237127858.6
fad/fmn-containing dehydrogenaseSAMN05216303_102522Not AvailablePositive2152373 - 215378850039.2
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenaseSAMN05216303_102523Not AvailablePositive2153846 - 215532152343.4
aromatic ring-opening dioxygenase, catalytic subunit, ligb familySAMN05216303_102524Not AvailablePositive2155393 - 215626832268.1
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomeraseSAMN05216303_102525Not AvailablePositive2156265 - 215720934450.2

Displaying genes 2001 – 2010 of 5247 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.