Albidiferax sp. OV413

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Rhodoferax

Description

Albidiferax sp. OV413 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which suggests it has the capability for motility. This species contains a single replicon, indicating it has a streamlined genetic structure that may contribute to its adaptability in various environments. The genomic data for Albidiferax sp. OV413 is available under the accession FNJA00000000.1, which facilitates further research and exploration into its biological properties. The morphological characteristics of Albidiferax sp. OV413 align with those of other members of the Albidiferax genus, known for their ecological roles in particular environments. While specific ecological interactions of Albidiferax sp. OV413 are not detailed, the motility conferred by its flagella may enable it to navigate through diverse habitats, potentially allowing it to exploit various ecological niches. This trait could be particularly beneficial in competitive environments where movement toward nutrient sources or away from harmful conditions is crucial for survival. Overall, the traits of Albidiferax sp. OV413 suggest a bacterium well-adapted for a dynamic ecological role, possibly contributing to biogeochemical processes in its environment. Understanding this organism further may provide insights into its ecological significance and its interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusRhodoferax
SpeciesRhodoferax sp. OV413
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Albidiferax sp. OV413
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Albidiferax sp. OV413 genome assembly, contig: Ga0066711_123,

Gene Summary

Adenine Count

1064911 bp

Thymine Count

1038556 bp

Guanine Count

1787662 bp

Cytosine Count

1845127 bp

Genome Length

5736266 bp

Protein-coding Genes

5155 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ser/thr protein kinase rdoa involved in cpx stress response, mazf antagonistSAMN05216303_102250Not AvailableNegative1870392 - 187139337137.3
predicted protein tyrosine phosphataseSAMN05216303_102251Not AvailableNegative1871475 - 187179812097.8
tripartite-type tricarboxylate transporter, receptor component tctcSAMN05216303_102252Not AvailableNegative1871926 - 187290634321.1
2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylaseSAMN05216303_102253Not AvailableNegative1872927 - 187351121506.8
dna-binding transcriptional regulator, lysr familySAMN05216303_102254Not AvailablePositive1873588 - 187455334804.3
multidrug efflux pump subunit acrbSAMN05216303_102255Not AvailableNegative1874601 - 1877717110738.0
rnd family efflux transporter, mfp subunitSAMN05216303_102256Not AvailableNegative1877729 - 187888640239.2
efflux transporter, outer membrane factor (omf) lipoprotein, nodt familySAMN05216303_102257Not AvailableNegative1878907 - 188031348739.4
diguanylate cyclase (ggdef) domain-containing proteinSAMN05216303_102258Not AvailableNegative1880624 - 188235162827.1
glutamate-ammonia-ligase adenylyltransferaseSAMN05216303_102259Not AvailableNegative1882358 - 1885096101461.0

Displaying genes 1791 – 1800 of 5247 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.