Polaromonas sp. JS666 strain JS666 UNC47MFTsu3.1

Gram-negativeBacilliNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Polaromonas

Description

Polaromonas sp. JS666 strain JS666 UNC47MFTsu3.1 is a Gram-negative, aerobic bacterium characterized by its bacilli shape. This strain exhibits a notable feature of possessing flagella, although it is non-motile, suggesting a unique adaptation in its ecological niche. The optimal growth temperature for this strain is 20°C, placing it within the mesophilic temperature range, which typically spans from 20°C to 45°C. Polaromonas sp. JS666 is a free-living organism, indicating that it thrives independently rather than in symbiotic relationships with other organisms. The strain has a single replicon, which may reflect its genomic organization and replication strategy. The accession number for this strain is FNHX00000000.1, providing a reference for further genetic and genomic studies. Understanding the traits of Polaromonas sp. JS666 can shed light on its potential roles in various ecological systems, particularly in environments that favor aerobic, mesophilic conditions. Its free-living nature suggests a potential for involvement in nutrient cycling and ecosystem dynamics, contributing to the overall health and stability of its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusPolaromonas
SpeciesPolaromonas sp. JS666
Strainstrain JS666 UNC47MFTsu3.1

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Polaromonas sp. JS666 strain JS666 UNC47MFTsu3.1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature20
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Polaromonas sp. JS666 strain JS666 UNC47MFTsu3.1 genome assembly,

Gene Summary

Adenine Count

898939 bp

Thymine Count

890167 bp

Guanine Count

1633122 bp

Cytosine Count

1648021 bp

Genome Length

5072534 bp

Protein-coding Genes

4717 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid/amide abc transporter atp-binding protein 2, haat familySAMN05720382_106162Not AvailablePositive3534765 - 353551126892.9
abc transporterSAMN05720382_106163Not AvailablePositive3535518 - 353614123456.2
regulatory protein, fis familySAMN05720382_106164Not AvailableNegative3536151 - 353795365070.3
benzaldehyde dehydrogenase (nad+)SAMN05720382_106165Not AvailablePositive3538213 - 353966750400.0
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN05720382_106166Not AvailablePositive3539738 - 354051427363.2
protein of unknown functionSAMN05720382_106167Not AvailablePositive3540595 - 354227159837.4
protein of unknown functionSAMN05720382_106168Not AvailablePositive3542310 - 354366849637.9
uncharacterized proteinSAMN05720382_106169Not AvailablePositive3543668 - 354472936079.3
hypothetical proteinSAMN05720382_106170Not AvailablePositive3544752 - 354719087504.3
abc-type branched-chain amino acid transport system, substrate-binding proteinSAMN05720382_106171Not AvailablePositive3547187 - 354829939503.0

Displaying genes 3351 – 3360 of 4769 in total

Metabolites

1745 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm00005166-deoxyerythronolide BC21H38O6Chemical structure of 6-deoxyerythronolide BNot available
Average386.5228Da
Monoisotopic386.2668389Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da

Displaying 1–10 of 1745 metabolites

Health Effects

No health effects information available for this bacterium.