Alicycliphilus sp. EPL6

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Oryzisolibacter

Description

Alicycliphilus sp. EPL6 is characterized by having a single replicon, indicating a streamlined genome organization that may contribute to its adaptability and efficiency in various environments. The organism is cataloged under the accession FNHP00000000.1, which serves as a reference for its genetic information. This bacterium is part of the Alicycliphilus genus, known for its unique metabolic capabilities and potential applications in bioremediation and wastewater treatment. While specific metabolic pathways and ecological roles of Alicycliphilus sp. EPL6 are not detailed, the genus is generally associated with the degradation of complex organic compounds, suggesting that this strain might play a role in the breakdown of pollutants in its environment. The presence of a single replicon can be advantageous for Alicycliphilus sp. EPL6, as it may simplify replication and segregation processes during cell division. This trait could allow the organism to respond more rapidly to environmental changes, making it a potentially resilient member of microbial communities. In summary, Alicycliphilus sp. EPL6, with its single replicon and reference accession FNHP00000000.1, likely possesses metabolic traits that enable it to thrive in diverse and possibly challenging environments. Its ecological role may involve the breakdown of organic pollutants, contributing to bioremediation efforts and highlighting the significance of microbial life in ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusOryzisolibacter
SpeciesOryzisolibacter propanilivorax
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Alicycliphilus sp. EPL6
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alicycliphilus sp. EPL6 genome assembly, contig: Ga0116911_124,

Gene Summary

Adenine Count

573508 bp

Thymine Count

571997 bp

Guanine Count

1282381 bp

Cytosine Count

1288029 bp

Genome Length

3715915 bp

Protein-coding Genes

3337 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iv secretion system protein vird4SAMN05428957_109132Not AvailablePositive3133626 - 313563573171.3
ribbon-helix-helix protein, copg familySAMN05428957_109133Not AvailablePositive3135632 - 313609017329.5
type iv secretion system protein virb11SAMN05428957_109134Not AvailablePositive3136087 - 313717238149.6
type iv secretion system protein virb2SAMN05428957_109135Not AvailablePositive3137169 - 313754612946.1
type iv secretion system protein virb3SAMN05428957_109136Not AvailablePositive3137543 - 313782710022.4
type iv secretion system protein virb4SAMN05428957_109137Not AvailablePositive3137840 - 313904444877.1
tar ligand binding domain homologueSAMN05428957_1101Not AvailableNegative3139045 - 313975425616.5
hypothetical proteinSAMN05428957_1102Not AvailablePositive3139923 - 314079231190.9
trna threonylcarbamoyl adenosine modification protein, sua5/ycio/yrdc/ywlc familySAMN05428957_1103Not AvailablePositive3140811 - 314144623166.3
hypothetical proteinSAMN05428957_1104Not AvailableNegative3141621 - 314189910176.0

Displaying genes 2881 – 2890 of 3434 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.