Alicycliphilus sp. EPL6

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Oryzisolibacter

Description

Alicycliphilus sp. EPL6 is characterized by having a single replicon, indicating a streamlined genome organization that may contribute to its adaptability and efficiency in various environments. The organism is cataloged under the accession FNHP00000000.1, which serves as a reference for its genetic information. This bacterium is part of the Alicycliphilus genus, known for its unique metabolic capabilities and potential applications in bioremediation and wastewater treatment. While specific metabolic pathways and ecological roles of Alicycliphilus sp. EPL6 are not detailed, the genus is generally associated with the degradation of complex organic compounds, suggesting that this strain might play a role in the breakdown of pollutants in its environment. The presence of a single replicon can be advantageous for Alicycliphilus sp. EPL6, as it may simplify replication and segregation processes during cell division. This trait could allow the organism to respond more rapidly to environmental changes, making it a potentially resilient member of microbial communities. In summary, Alicycliphilus sp. EPL6, with its single replicon and reference accession FNHP00000000.1, likely possesses metabolic traits that enable it to thrive in diverse and possibly challenging environments. Its ecological role may involve the breakdown of organic pollutants, contributing to bioremediation efforts and highlighting the significance of microbial life in ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusOryzisolibacter
SpeciesOryzisolibacter propanilivorax
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Alicycliphilus sp. EPL6
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alicycliphilus sp. EPL6 genome assembly, contig: Ga0116911_124,

Gene Summary

Adenine Count

573508 bp

Thymine Count

571997 bp

Guanine Count

1282381 bp

Cytosine Count

1288029 bp

Genome Length

3715915 bp

Protein-coding Genes

3337 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutathione transport system permease proteinSAMN05428957_102432Not AvailablePositive1108706 - 110961132436.8
l-aminopeptidase dmpa. serine peptidase. merops family s58SAMN05428957_102433Not AvailablePositive1109608 - 111062734914.9
d-aminopeptidase dppa. metallo peptidase. merops family m55SAMN05428957_102434Not AvailablePositive1110694 - 111151229051.1
aspartate racemaseSAMN05428957_102435Not AvailablePositive1111682 - 111242226198.7
dna-binding transcriptional regulator, lysr familySAMN05428957_102436Not AvailablePositive1112474 - 111338832740.1
d-amino-acid dehydrogenaseSAMN05428957_102437Not AvailableNegative1113389 - 111458542319.9
amino acid abc transporter substrate-binding protein, paat familySAMN05428957_102438Not AvailablePositive1114857 - 111574431868.1
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN05428957_102439Not AvailablePositive1115896 - 111677730583.4
snoal-like domain-containing proteinSAMN05428957_102440Not AvailablePositive1116788 - 111725817322.4
trna modification gtpase trmeSAMN05428957_102441Not AvailablePositive1117436 - 111882148734.6

Displaying genes 1061 – 1070 of 3434 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.