Alicycliphilus sp. EPL6

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Oryzisolibacter

Description

Alicycliphilus sp. EPL6 is characterized by having a single replicon, indicating a streamlined genome organization that may contribute to its adaptability and efficiency in various environments. The organism is cataloged under the accession FNHP00000000.1, which serves as a reference for its genetic information. This bacterium is part of the Alicycliphilus genus, known for its unique metabolic capabilities and potential applications in bioremediation and wastewater treatment. While specific metabolic pathways and ecological roles of Alicycliphilus sp. EPL6 are not detailed, the genus is generally associated with the degradation of complex organic compounds, suggesting that this strain might play a role in the breakdown of pollutants in its environment. The presence of a single replicon can be advantageous for Alicycliphilus sp. EPL6, as it may simplify replication and segregation processes during cell division. This trait could allow the organism to respond more rapidly to environmental changes, making it a potentially resilient member of microbial communities. In summary, Alicycliphilus sp. EPL6, with its single replicon and reference accession FNHP00000000.1, likely possesses metabolic traits that enable it to thrive in diverse and possibly challenging environments. Its ecological role may involve the breakdown of organic pollutants, contributing to bioremediation efforts and highlighting the significance of microbial life in ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusOryzisolibacter
SpeciesOryzisolibacter propanilivorax
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Alicycliphilus sp. EPL6
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alicycliphilus sp. EPL6 genome assembly, contig: Ga0116911_124,

Gene Summary

Adenine Count

573508 bp

Thymine Count

571997 bp

Guanine Count

1282381 bp

Cytosine Count

1288029 bp

Genome Length

3715915 bp

Protein-coding Genes

3337 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing proteinSAMN05428957_102362Not AvailablePositive1032968 - 1037251156050.0
trka-c domain-containing proteinSAMN05428957_102363Not AvailableNegative1037267 - 103907264051.1
lipid a 3-o-deacylaseSAMN05428957_102364Not AvailableNegative1039465 - 104006121542.7
ltxxq motif family proteinSAMN05428957_102365Not AvailableNegative1040184 - 104081322954.1
recombination associated protein rdgcSAMN05428957_102366Not AvailablePositive1041019 - 104201435256.8
spore maturation protein spmaSAMN05428957_102367Not AvailablePositive1042207 - 104346042483.2
protein of unknown functionSAMN05428957_102368Not AvailablePositive1044017 - 10442779654.66
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomeraseSAMN05428957_102369Not AvailableNegative1044378 - 104488718008.9
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomeraseSAMN05428957_102370Not AvailableNegative1044911 - 10451628439.19
glutathione s-transferaseSAMN05428957_102371Not AvailableNegative1045272 - 104590422853.6

Displaying genes 991 – 1000 of 3434 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.