Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Daejeonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Daejeonella |
| Species | Daejeonella rubra |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1308496 bp
Thymine Count
1307397 bp
Guanine Count
834775 bp
Cytosine Count
828617 bp
Genome Length
4279285 bp
Protein-coding Genes
3702 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ccmd family protein | SAMN05421813_102136 | Not Available | Positive | 486194 - 486409 | 7987.2 |
| glutamate dehydrogenase (nad(p)+) | SAMN05421813_102137 | Not Available | Positive | 486563 - 487999 | 52180.5 |
| cytochrome c-type biogenesis protein ccme | SAMN05421813_102138 | Not Available | Positive | 488162 - 488572 | 15117.9 |
| cytochrome c-type biogenesis protein ccmf | SAMN05421813_102139 | Not Available | Positive | 488580 - 491045 | 93106.5 |
| predicted oxidoreductase, contains short-chain dehydrogenase (sdr) and duf2520 domains | SAMN05421813_102140 | Not Available | Positive | 491045 - 491821 | 28476.1 |
| ferredoxin, 2fe-2s | SAMN05421813_102141 | Not Available | Positive | 491846 - 492178 | 12187.5 |
| fes assembly protein iscx | SAMN05421813_102142 | Not Available | Positive | 492191 - 492433 | 9637.14 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase) | SAMN05421813_102143 | Not Available | Positive | 492551 - 493084 | 19264.5 |
| hypothetical protein | SAMN05421813_102144 | Not Available | Positive | 493141 - 493500 | 13787.9 |
| septum formation protein | SAMN05421813_102145 | Not Available | Positive | 493570 - 494145 | 21343.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
