Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Daejeonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Daejeonella |
| Species | Daejeonella rubra |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1308496 bp
Thymine Count
1307397 bp
Guanine Count
834775 bp
Cytosine Count
828617 bp
Genome Length
4279285 bp
Protein-coding Genes
3702 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c | SAMN05421813_10296 | Not Available | Negative | 437835 - 438245 | 14031.8 |
| sugar phosphate isomerase/epimerase | SAMN05421813_10297 | Not Available | Negative | 438287 - 439339 | 39615.7 |
| predicted dehydrogenase | SAMN05421813_10298 | Not Available | Negative | 439350 - 440483 | 41290.4 |
| aldose 1-epimerase | SAMN05421813_10299 | Not Available | Negative | 440695 - 441930 | 45942.7 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN05421813_102100 | Not Available | Negative | 441937 - 445338 | 125533.0 |
| nucleoside transporter | SAMN05421813_102101 | Not Available | Positive | 445744 - 446958 | 44978.2 |
| hydroxypyruvate isomerase | SAMN05421813_102102 | Not Available | Positive | 446964 - 447845 | 33035.9 |
| choline dehydrogenase | SAMN05421813_102103 | Not Available | Positive | 447896 - 449575 | 62726.5 |
| gluconate 2-dehydrogenase subunit 3 | SAMN05421813_102104 | Not Available | Positive | 449587 - 450159 | 21355.5 |
| oxidoreductase family, nad-binding rossmann fold | SAMN05421813_102105 | Not Available | Positive | 450193 - 451638 | 53305.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
