Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Daejeonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Daejeonella |
| Species | Daejeonella rubra |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1308496 bp
Thymine Count
1307397 bp
Guanine Count
834775 bp
Cytosine Count
828617 bp
Genome Length
4279285 bp
Protein-coding Genes
3702 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative phosphoribosyl transferase | SAMN05421813_10118 | Not Available | Positive | 16583 - 17233 | 23987.0 |
| predicted phosphoribosyltransferase | SAMN05421813_10119 | Not Available | Positive | 17261 - 17893 | 23083.2 |
| hydroxypyruvate isomerase | SAMN05421813_10120 | Not Available | Negative | 17947 - 18864 | 33502.3 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN05421813_10121 | Not Available | Negative | 18900 - 20225 | 48903.8 |
| formylglycine-generating enzyme, required for sulfatase activity, contains sumf1/fge domain | SAMN05421813_10122 | Not Available | Negative | 20243 - 21229 | 37623.3 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN05421813_10123 | Not Available | Negative | 21434 - 22645 | 43926.6 |
| uncharacterized zinc-type alcohol dehydrogenase-like protein | SAMN05421813_10124 | Not Available | Negative | 22713 - 23759 | 38189.4 |
| predicted metal-dependent hydrolase, tim-barrel fold | SAMN05421813_10125 | Not Available | Positive | 23999 - 24952 | 35504.6 |
| lysophospholipase l1 | SAMN05421813_10126 | Not Available | Negative | 24956 - 25681 | 27129.2 |
| right handed beta helix region | SAMN05421813_10127 | Not Available | Negative | 25798 - 26940 | 41091.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
