Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Daejeonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Daejeonella |
| Species | Daejeonella rubra |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1308496 bp
Thymine Count
1307397 bp
Guanine Count
834775 bp
Cytosine Count
828617 bp
Genome Length
4279285 bp
Protein-coding Genes
3702 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin | SAMN05421813_101237 | Not Available | Positive | 252061 - 253149 | 41048.6 |
| two-component system, ompr family, alkaline phosphatase synthesis response regulator phop | SAMN05421813_101238 | Not Available | Positive | 253252 - 253944 | 26419.2 |
| 23s rrna pseudouridine955/2504/2580 synthase | SAMN05421813_101239 | Not Available | Positive | 254217 - 254936 | 27741.6 |
| family of unknown function | SAMN05421813_101240 | Not Available | Negative | 254933 - 255469 | 20582.6 |
| arginine decarboxylase | SAMN05421813_101241 | Not Available | Negative | 255529 - 256959 | 55658.6 |
| arginase | SAMN05421813_101242 | Not Available | Positive | 257020 - 257967 | 35065.2 |
| arginyl-trna synthetase | SAMN05421813_101243 | Not Available | Positive | 257994 - 259772 | 67445.7 |
| 3-hydroxybutyryl-coa dehydrogenase | SAMN05421813_101244 | Not Available | Negative | 260053 - 260943 | 32090.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421813_101245 | Not Available | Positive | 261310 - 264444 | 113353.0 |
| susd family protein | SAMN05421813_101246 | Not Available | Positive | 264495 - 265919 | 51952.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
