Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Daejeonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Daejeonella |
| Species | Daejeonella rubra |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1308496 bp
Thymine Count
1307397 bp
Guanine Count
834775 bp
Cytosine Count
828617 bp
Genome Length
4279285 bp
Protein-coding Genes
3702 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421813_109124 | Not Available | Positive | 1992149 - 1992745 | 22084.5 |
| concentrative nucleoside transporter, cnt family | SAMN05421813_109125 | Not Available | Positive | 1992818 - 1994092 | 44969.7 |
| citrate synthase | SAMN05421813_109126 | Not Available | Negative | 1994186 - 1995472 | 48241.8 |
| protein of unknown function | SAMN05421813_109127 | Not Available | Negative | 1995666 - 1996202 | 19438.1 |
| uncharacterized conserved protein | SAMN05421813_109128 | Not Available | Negative | 1996287 - 1996502 | 8266.18 |
| smr domain-containing protein | SAMN05421813_109129 | Not Available | Positive | 1996631 - 1997575 | 36041.0 |
| peptide chain release factor 3 | SAMN05421813_109130 | Not Available | Positive | 1997727 - 1999325 | 60704.4 |
| murein l,d-transpeptidase ycbb/ykud | SAMN05421813_109131 | Not Available | Negative | 1999388 - 2001088 | 65596.5 |
| molecular chaperone htpg | SAMN05421813_109132 | Not Available | Positive | 2001330 - 2003213 | 71270.0 |
| zinc carboxypeptidase | SAMN05421813_109133 | Not Available | Positive | 2003333 - 2004535 | 45636.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
