Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN04488090_0974 | Not Available | Positive | 1291426 - 1292433 | 38007.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_0975 | Not Available | Positive | 1292659 - 1296024 | 122328.0 |
| starch-binding associating with outer membrane | SAMN04488090_0976 | Not Available | Positive | 1296028 - 1297671 | 60783.6 |
| arylsulfatase a | SAMN04488090_0977 | Not Available | Positive | 1297719 - 1299248 | 55346.9 |
| haem-binding domain-containing protein | SAMN04488090_0978 | Not Available | Positive | 1299300 - 1299791 | 18556.0 |
| zinc carboxypeptidase | SAMN04488090_0979 | Not Available | Positive | 1299871 - 1301607 | 66935.5 |
| protein of unknown function, duf481 | SAMN04488090_0980 | Not Available | Positive | 1301705 - 1302529 | 31287.2 |
| lipoprotein-releasing system atp-binding protein | SAMN04488090_0981 | Not Available | Negative | 1302526 - 1303167 | 23579.4 |
| succinyl-coa synthetase beta subunit | SAMN04488090_0982 | Not Available | Positive | 1303361 - 1304557 | 43253.4 |
| peptidase family m48 | SAMN04488090_0983 | Not Available | Negative | 1304747 - 1305580 | 30676.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
