Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bama | SAMN04488090_0964 | Not Available | Positive | 1279947 - 1282442 | 95543.4 |
| pp_00955 | SAMN04488090_0965 | Not Available | Positive | 1282622 - 1284046 | Not Available |
| transcriptional regulator | SAMN04488090_0966 | Not Available | Positive | 1284089 - 1285369 | 47946.3 |
| lipopolysaccharide-assembly | SAMN04488090_0967 | Not Available | Positive | 1285359 - 1285862 | 18229.7 |
| hypothetical protein | SAMN04488090_0968 | Not Available | Positive | 1286100 - 1286792 | 26123.3 |
| preprotein translocase subunit secg | SAMN04488090_0969 | Not Available | Positive | 1286832 - 1287182 | 11740.4 |
| hypothetical protein | SAMN04488090_0970 | Not Available | Negative | 1287365 - 1288072 | 27458.1 |
| chaperonin groes | SAMN04488090_0971 | Not Available | Positive | 1288309 - 1288605 | 10382.5 |
| chaperonin groel | SAMN04488090_0972 | Not Available | Positive | 1288675 - 1290303 | 57659.1 |
| rna polymerase sigma factor, sigma-70 family | SAMN04488090_0973 | Not Available | Positive | 1290770 - 1291357 | 23048.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
