Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_0934 | Not Available | Negative | 1244579 - 1246375 | 60320.1 |
| Trna-arg | Not Available | Not Available | Positive | 1247000 - 1247073 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 1247126 - 1247199 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 1247247 - 1247337 | Not Available |
| ca-activated chloride channel family protein | SAMN04488090_0938 | Not Available | Positive | 1247439 - 1248401 | 35355.9 |
| hypothetical protein | SAMN04488090_0939 | Not Available | Positive | 1248410 - 1249087 | 25806.7 |
| acetyl-coa c-acetyltransferase | SAMN04488090_0940 | Not Available | Positive | 1249110 - 1250288 | 40916.9 |
| phosphoribosylaminoimidazole-succinocarboxamide synthase | SAMN04488090_0941 | Not Available | Positive | 1250344 - 1251285 | 35216.7 |
| anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) | SAMN04488090_0942 | Not Available | Positive | 1251314 - 1251760 | 16592.2 |
| rnase z | SAMN04488090_0943 | Not Available | Positive | 1251834 - 1252787 | 35968.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
