Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488090_0923 | Not Available | Positive | 1230747 - 1231877 | 41707.6 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488090_0924 | Not Available | Positive | 1231874 - 1233022 | 43089.3 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488090_0925 | Not Available | Positive | 1233023 - 1233943 | 36326.6 |
| putative colanic acid biosynthesis acetyltransferase wcaf | SAMN04488090_0926 | Not Available | Positive | 1233915 - 1234481 | 21143.6 |
| udp-n-acetylmuramyl pentapeptide phosphotransferase/udp-n-acetylglucosamine-1-phosphate transferase | SAMN04488090_0927 | Not Available | Positive | 1234677 - 1235852 | 43424.6 |
| predicted dehydrogenase | SAMN04488090_0928 | Not Available | Positive | 1235975 - 1237345 | 50946.3 |
| arylsulfatase a | SAMN04488090_0929 | Not Available | Negative | 1237413 - 1238849 | 53407.1 |
| hydroxyneurosporene-o-methyltransferase | SAMN04488090_0930 | Not Available | Positive | 1238967 - 1240010 | 38210.7 |
| hypothetical protein | SAMN04488090_0932 | Not Available | Negative | 1241392 - 1243884 | 90273.1 |
| hypothetical protein | SAMN04488090_0933 | Not Available | Negative | 1244196 - 1244555 | 12930.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
