Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_0913 | Not Available | Positive | 1220323 - 1221318 | 38725.6 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488090_0914 | Not Available | Positive | 1221322 - 1222425 | 42259.5 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488090_0915 | Not Available | Positive | 1222517 - 1223650 | 43242.1 |
| hypothetical protein | SAMN04488090_0916 | Not Available | Positive | 1223666 - 1224658 | 39443.8 |
| heptosyltransferase-3 | SAMN04488090_0917 | Not Available | Positive | 1224665 - 1225717 | 39971.2 |
| prepilin-type processing-associated h-x9-dg domain-containing protein | SAMN04488090_0918 | Not Available | Positive | 1225725 - 1226666 | 35584.6 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488090_0919 | Not Available | Positive | 1226785 - 1227759 | 37306.4 |
| hypothetical protein | SAMN04488090_0920 | Not Available | Positive | 1227774 - 1228490 | 27201.8 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488090_0921 | Not Available | Positive | 1228502 - 1229395 | 34721.5 |
| hypothetical protein | SAMN04488090_0922 | Not Available | Positive | 1229405 - 1230745 | 49617.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
