Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division transport system permease protein | SAMN04488090_0893 | Not Available | Positive | 1197822 - 1198700 | 32651.5 |
| protein of unknown function | SAMN04488090_0894 | Not Available | Positive | 1198713 - 1198937 | 8334.53 |
| undecaprenyl-diphosphatase | SAMN04488090_0895 | Not Available | Positive | 1199028 - 1199822 | 29130.4 |
| trna pseudouridine synthase b | SAMN04488090_0896 | Not Available | Positive | 1199919 - 1200632 | 26251.6 |
| riboflavin kinase / fmn adenylyltransferase | SAMN04488090_0897 | Not Available | Positive | 1200636 - 1201577 | 35216.1 |
| hypothetical protein | SAMN04488090_0898 | Not Available | Negative | 1201558 - 1201926 | 13532.5 |
| hypothetical protein | SAMN04488090_0899 | Not Available | Positive | 1202152 - 1203753 | 60705.0 |
| chorismate mutase | SAMN04488090_0900 | Not Available | Negative | 1203804 - 1204880 | 40710.6 |
| glycosyl transferase family 2 | SAMN04488090_0901 | Not Available | Negative | 1204893 - 1205846 | 37023.0 |
| udp-4-amino-4, 6-dideoxy-n-acetyl-beta-l-altrosamine n-acetyltransferase | SAMN04488090_0902 | Not Available | Negative | 1205874 - 1206386 | 20067.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
