Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ompa family protein | SAMN04488090_0079 | Not Available | Positive | 105636 - 106928 | 46947.2 |
| integral membrane protein | SAMN04488090_0080 | Not Available | Negative | 106967 - 107260 | 10967.0 |
| hypothetical protein | SAMN04488090_0081 | Not Available | Negative | 107260 - 107724 | 17651.9 |
| transcriptional regulator, arac family | SAMN04488090_0082 | Not Available | Negative | 107798 - 108694 | 33739.9 |
| arac-type dna-binding protein | SAMN04488090_0083 | Not Available | Negative | 108697 - 109494 | 30127.1 |
| iron complex outermembrane recepter protein | SAMN04488090_0084 | Not Available | Negative | 109700 - 112150 | 90393.0 |
| transcriptional regulator, arac family | SAMN04488090_0085 | Not Available | Positive | 112285 - 113265 | 36961.2 |
| cubico group peptidase, beta-lactamase class c family | SAMN04488090_0086 | Not Available | Negative | 113305 - 114867 | 58545.4 |
| hypothetical protein | SAMN04488090_0087 | Not Available | Negative | 115373 - 116269 | 33628.3 |
| hypothetical protein | SAMN04488090_0088 | Not Available | Positive | 116767 - 117609 | 31254.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
