Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_0883 | Not Available | Negative | 1188873 - 1189523 | 24210.1 |
| two component transcriptional regulator, lyttr family | SAMN04488090_0884 | Not Available | Negative | 1189618 - 1190343 | 27240.8 |
| histidine kinase | SAMN04488090_0885 | Not Available | Negative | 1190340 - 1191359 | 39384.3 |
| endonuclease g | SAMN04488090_0886 | Not Available | Negative | 1191450 - 1192358 | 34883.2 |
| purine-nucleoside phosphorylase | SAMN04488090_0887 | Not Available | Positive | 1192471 - 1193295 | 29633.2 |
| predicted dehydrogenase | SAMN04488090_0888 | Not Available | Positive | 1193334 - 1194623 | 48894.1 |
| hypothetical protein | SAMN04488090_0889 | Not Available | Negative | 1194815 - 1195132 | 12306.2 |
| electron transfer flavoprotein beta subunit | SAMN04488090_0890 | Not Available | Positive | 1195277 - 1196014 | 26222.7 |
| electron transfer flavoprotein alpha subunit apoprotein | SAMN04488090_0891 | Not Available | Positive | 1196042 - 1197004 | 32968.5 |
| hypothetical protein | SAMN04488090_0892 | Not Available | Positive | 1197124 - 1197711 | 21775.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
