Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein | SAMN04488090_0873 | Not Available | Positive | 1180072 - 1180581 | 18947.6 |
| cyclopropane-fatty-acyl-phospholipid synthase | SAMN04488090_0874 | Not Available | Negative | 1180604 - 1181506 | 33465.9 |
| hypothetical protein | SAMN04488090_0875 | Not Available | Positive | 1182015 - 1182284 | 10112.0 |
| hypothetical protein | SAMN04488090_0876 | Not Available | Negative | 1182423 - 1183052 | 24161.8 |
| hypothetical protein | SAMN04488090_0877 | Not Available | Negative | 1183015 - 1183953 | 36049.2 |
| phnb protein | SAMN04488090_0878 | Not Available | Negative | 1184502 - 1184936 | 16118.8 |
| Trna-leu | Not Available | Not Available | Positive | 1185171 - 1185254 | Not Available |
| putative abc transport system permease protein | SAMN04488090_0880 | Not Available | Negative | 1185345 - 1186586 | 44231.9 |
| hypothetical protein | SAMN04488090_0881 | Not Available | Positive | 1186717 - 1187979 | 48460.5 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04488090_0882 | Not Available | Negative | 1188285 - 1188854 | 20458.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
