Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/melibiose symporter | SAMN04488090_0863 | Not Available | Positive | 1167296 - 1168558 | 45083.1 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_0864 | Not Available | Negative | 1168618 - 1170534 | 66408.7 |
| two component transcriptional regulator, luxr family | SAMN04488090_0865 | Not Available | Positive | 1171438 - 1172052 | 22598.3 |
| signal transduction histidine kinase | SAMN04488090_0866 | Not Available | Negative | 1172359 - 1174353 | 73948.8 |
| hypothetical protein | SAMN04488090_0867 | Not Available | Positive | 1174370 - 1174489 | 4810.58 |
| transcriptional regulator, arsr family | SAMN04488090_0868 | Not Available | Positive | 1174512 - 1174841 | 11727.3 |
| hypothetical protein | SAMN04488090_0869 | Not Available | Positive | 1174890 - 1175339 | 16331.6 |
| protein tyrosine phosphatase | SAMN04488090_0870 | Not Available | Positive | 1175369 - 1175785 | 15435.0 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_0871 | Not Available | Negative | 1175863 - 1177560 | 60734.6 |
| uncharacterized conserved protein yafd, endonuclease/exonuclease/phosphatase (eep) superfamily | SAMN04488090_0872 | Not Available | Positive | 1178013 - 1180004 | 73892.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
