Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, arac family | SAMN04488090_0853 | Not Available | Positive | 1157282 - 1158085 | 30731.9 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN04488090_0854 | Not Available | Negative | 1158436 - 1159314 | 30928.9 |
| transcriptional regulator, gntr family | SAMN04488090_0855 | Not Available | Positive | 1159409 - 1160821 | 52053.4 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_0856 | Not Available | Negative | 1160879 - 1162999 | 78406.9 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04488090_0857 | Not Available | Negative | 1163307 - 1163786 | 18314.6 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488090_0858 | Not Available | Positive | 1164029 - 1164607 | 22130.7 |
| nucleoside-diphosphate-sugar epimerase | SAMN04488090_0859 | Not Available | Positive | 1164685 - 1165581 | 31545.4 |
| hypothetical protein | SAMN04488090_0860 | Not Available | Positive | 1165704 - 1166126 | 15657.2 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488090_0861 | Not Available | Positive | 1166128 - 1166634 | 18674.7 |
| transcriptional regulator, arsr family | SAMN04488090_0862 | Not Available | Positive | 1166646 - 1167299 | 24689.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
