Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN04488090_0843 | Not Available | Positive | 1146951 - 1147877 | 34326.8 |
| iron complex outermembrane recepter protein | SAMN04488090_0844 | Not Available | Positive | 1147999 - 1150707 | 98799.7 |
| activator of hsp90 atpase homolog 1-like protein | SAMN04488090_0845 | Not Available | Negative | 1150765 - 1151208 | 17073.3 |
| transcriptional regulator, hxlr family | SAMN04488090_0846 | Not Available | Negative | 1151334 - 1151693 | 13531.6 |
| hypothetical protein | SAMN04488090_0847 | Not Available | Positive | 1151777 - 1152325 | 20214.7 |
| hypothetical protein | SAMN04488090_0848 | Not Available | Negative | 1152352 - 1154568 | 82614.0 |
| tfox n-terminal domain-containing protein | SAMN04488090_0849 | Not Available | Positive | 1154760 - 1155092 | 12443.2 |
| hypothetical protein | SAMN04488090_0850 | Not Available | Positive | 1155131 - 1155517 | 13765.3 |
| phnb protein | SAMN04488090_0851 | Not Available | Positive | 1155547 - 1155996 | 16329.2 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488090_0852 | Not Available | Positive | 1156241 - 1157260 | 36311.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
