Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_0833 | Not Available | Negative | 1135375 - 1135833 | 17362.8 |
| hypothetical protein | SAMN04488090_0834 | Not Available | Negative | 1135814 - 1137124 | 48228.2 |
| dna-binding transcriptional regulator, marr family | SAMN04488090_0835 | Not Available | Positive | 1137524 - 1137955 | 16432.2 |
| peroxiredoxin, ohr subfamily | SAMN04488090_0836 | Not Available | Positive | 1137952 - 1138374 | 14626.4 |
| nitroreductase | SAMN04488090_0837 | Not Available | Positive | 1138386 - 1139027 | 24067.7 |
| dna-3-methyladenine glycosylase i | SAMN04488090_0838 | Not Available | Negative | 1139292 - 1139840 | 21106.2 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN04488090_0839 | Not Available | Positive | 1140102 - 1141928 | 67545.0 |
| signal transduction histidine kinase | SAMN04488090_0840 | Not Available | Positive | 1141925 - 1143808 | 69859.9 |
| tonb-dependent receptor plug domain | SAMN04488090_0841 | Not Available | Positive | 1143895 - 1146249 | 88279.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488090_0842 | Not Available | Positive | 1146366 - 1146881 | 19994.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
