Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyl-gamma-glutamyl-phosphate reductase | SAMN04488090_0813 | Not Available | Negative | 1115630 - 1116295 | 24462.9 |
| arac-type dna-binding protein | SAMN04488090_0814 | Not Available | Positive | 1116499 - 1117323 | 30933.2 |
| outer membrane receptor proteins, mostly fe transport | SAMN04488090_0815 | Not Available | Positive | 1117414 - 1119840 | 90217.7 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488090_0816 | Not Available | Positive | 1120047 - 1120748 | 26766.0 |
| protein of unknown function | SAMN04488090_0817 | Not Available | Negative | 1120833 - 1121588 | 29780.7 |
| chromate transporter | SAMN04488090_0818 | Not Available | Negative | 1121592 - 1122728 | 41307.7 |
| protein of unknown function | SAMN04488090_0819 | Not Available | Negative | 1122734 - 1123699 | 34291.5 |
| hypothetical protein | SAMN04488090_0820 | Not Available | Negative | 1123778 - 1124611 | 32234.1 |
| polyisoprenoid-binding protein ycei | SAMN04488090_0821 | Not Available | Negative | 1124720 - 1125259 | 19753.6 |
| hypothetical protein | SAMN04488090_0822 | Not Available | Negative | 1125264 - 1125923 | 23594.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
