Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted dehydrogenase | SAMN04488090_0793 | Not Available | Negative | 1089461 - 1090624 | 42660.3 |
| xylose isomerase-like tim barrel | SAMN04488090_0794 | Not Available | Negative | 1090706 - 1091731 | 38005.9 |
| hypothetical protein | SAMN04488090_0795 | Not Available | Negative | 1091842 - 1093059 | 45254.6 |
| protein of unknown function | SAMN04488090_0796 | Not Available | Negative | 1093081 - 1094142 | 39135.1 |
| protein of unknown function | SAMN04488090_0797 | Not Available | Negative | 1094162 - 1094920 | 28263.6 |
| putative heme-binding domain-containing protein | SAMN04488090_0798 | Not Available | Negative | 1095021 - 1097723 | 99863.7 |
| starch-binding associating with outer membrane | SAMN04488090_0799 | Not Available | Negative | 1097856 - 1099409 | 57363.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_0800 | Not Available | Negative | 1099432 - 1102587 | 115239.0 |
| phenazine biosynthesis protein phzf family | SAMN04488090_0801 | Not Available | Negative | 1103078 - 1103872 | 29169.8 |
| transcriptional regulator, tetr family | SAMN04488090_0802 | Not Available | Positive | 1103986 - 1104585 | 22849.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
