Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-galactosidase | SAMN04488090_0069 | Not Available | Positive | 94004 - 96043 | 76982.8 |
| hexosaminidase | SAMN04488090_0070 | Not Available | Positive | 96048 - 97580 | 58046.5 |
| predicted oxidoreductase | SAMN04488090_0071 | Not Available | Positive | 97682 - 98506 | 29966.9 |
| protein of unknown function | SAMN04488090_0072 | Not Available | Negative | 98503 - 99408 | 34049.9 |
| dna helicase, putative | SAMN04488090_0073 | Not Available | Positive | 99474 - 101354 | 70852.5 |
| protein of unknown function | SAMN04488090_0074 | Not Available | Negative | 101358 - 101756 | 14970.2 |
| hypothetical protein | SAMN04488090_0075 | Not Available | Negative | 101722 - 102495 | 28885.3 |
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN04488090_0076 | Not Available | Negative | 102549 - 103442 | 33198.6 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_0077 | Not Available | Positive | 103946 - 105100 | 41646.0 |
| hypothetical protein | SAMN04488090_0078 | Not Available | Negative | 105101 - 105436 | 12454.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
