Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysophospholipase, alpha-beta hydrolase superfamily | SAMN04488090_0783 | Not Available | Negative | 1079820 - 1080650 | 31345.1 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488090_0784 | Not Available | Positive | 1080916 - 1081506 | 23085.7 |
| cubico group peptidase, beta-lactamase class c family | SAMN04488090_0785 | Not Available | Negative | 1081507 - 1082883 | 51949.3 |
| sensor histidine kinase yesm | SAMN04488090_0786 | Not Available | Positive | 1083019 - 1084650 | 61046.6 |
| two component transcriptional regulator, lyttr family | SAMN04488090_0787 | Not Available | Positive | 1084625 - 1085305 | 25705.2 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_0788 | Not Available | Negative | 1085360 - 1085734 | 13347.0 |
| hypothetical protein | SAMN04488090_0789 | Not Available | Negative | 1085744 - 1085887 | 5613.86 |
| monosaccharide abc transporter substrate-binding protein, cut2 family | SAMN04488090_0790 | Not Available | Negative | 1085973 - 1086896 | 32768.7 |
| monosaccharide abc transporter membrane protein, cut2 family | SAMN04488090_0791 | Not Available | Negative | 1086893 - 1087861 | 33138.4 |
| monosaccharide abc transporter atp-binding protein, cut2 family | SAMN04488090_0792 | Not Available | Negative | 1087872 - 1089365 | 53519.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
