Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_0773 | Not Available | Positive | 1071447 - 1071896 | 16973.7 |
| membrane protease subunit, stomatin/prohibitin family, contains c-terminal zn-ribbon domain | SAMN04488090_0774 | Not Available | Negative | 1072008 - 1073006 | 36693.0 |
| xylulokinase | SAMN04488090_0775 | Not Available | Positive | 1073412 - 1074902 | 53384.1 |
| hypothetical protein | SAMN04488090_0776 | Not Available | Positive | 1075047 - 1075514 | 17221.2 |
| 3-methyladenine dna glycosylase alkd | SAMN04488090_0777 | Not Available | Positive | 1075511 - 1076176 | 25401.4 |
| oxepin-coa hydrolase / 3-oxo-5,6-dehydrosuberyl-coa semialdehyde dehydrogenase | SAMN04488090_0778 | Not Available | Positive | 1076329 - 1076787 | 17766.2 |
| hypothetical protein | SAMN04488090_0779 | Not Available | Negative | 1076886 - 1077149 | 9696.59 |
| protein of unknown function | SAMN04488090_0780 | Not Available | Positive | 1077215 - 1077898 | 26235.9 |
| 3-oxoacyl-[acyl-carrier-protein] synthase ii | SAMN04488090_0781 | Not Available | Negative | 1077899 - 1079149 | 43291.4 |
| transcriptional regulator, tetr family | SAMN04488090_0782 | Not Available | Negative | 1079189 - 1079776 | 21832.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
