Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_0763 | Not Available | Negative | 1059535 - 1059834 | 11164.3 |
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN04488090_0764 | Not Available | Positive | 1060031 - 1060663 | 24247.2 |
| carboxypepd_reg-like domain-containing protein | SAMN04488090_0765 | Not Available | Positive | 1060805 - 1063333 | 95785.1 |
| iron(iii) transport system atp-binding protein | SAMN04488090_0766 | Not Available | Negative | 1063817 - 1064578 | 27807.8 |
| hypothetical protein | SAMN04488090_0767 | Not Available | Negative | 1064617 - 1066284 | 62543.4 |
| abc-2 type transport system atp-binding protein | SAMN04488090_0768 | Not Available | Negative | 1066287 - 1067054 | 28086.2 |
| hypothetical protein | SAMN04488090_0769 | Not Available | Negative | 1067051 - 1068277 | 46029.3 |
| hypothetical protein | SAMN04488090_0770 | Not Available | Positive | 1068479 - 1069150 | 24130.2 |
| hypothetical protein | SAMN04488090_0771 | Not Available | Positive | 1069177 - 1070196 | 38120.6 |
| ppx/gppa phosphatase family protein | SAMN04488090_0772 | Not Available | Positive | 1070230 - 1071258 | 37276.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
