Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-rhamnosidase | SAMN04488090_0753 | Not Available | Negative | 1044309 - 1046948 | 98506.1 |
| hypothetical protein | SAMN04488090_0754 | Not Available | Negative | 1047175 - 1047609 | 15696.0 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_0755 | Not Available | Positive | 1047732 - 1049354 | 60241.5 |
| hypothetical protein | SAMN04488090_0756 | Not Available | Positive | 1049360 - 1051384 | 76943.7 |
| cubico group peptidase, beta-lactamase class c family | SAMN04488090_0757 | Not Available | Positive | 1051605 - 1053059 | 53695.5 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN04488090_0758 | Not Available | Positive | 1053162 - 1054553 | 51115.6 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN04488090_0759 | Not Available | Negative | 1054622 - 1056739 | 79296.4 |
| holliday junction endonuclease ruvc | SAMN04488090_0760 | Not Available | Negative | 1056781 - 1057362 | 21020.6 |
| lysylphosphatidylglycerol synthase tm region | SAMN04488090_0761 | Not Available | Positive | 1057422 - 1058426 | 37157.0 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN04488090_0762 | Not Available | Positive | 1058413 - 1059534 | 41415.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
