Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_0743 | Not Available | Negative | 1021008 - 1021163 | 6225.65 |
| rhs repeat-associated core domain-containing protein | SAMN04488090_0744 | Not Available | Positive | 1021281 - 1024448 | 117114.0 |
| hypothetical protein | SAMN04488090_0745 | Not Available | Positive | 1024461 - 1024877 | 16300.5 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_0746 | Not Available | Positive | 1025060 - 1027351 | 81918.7 |
| hypothetical protein | SAMN04488090_0747 | Not Available | Positive | 1027386 - 1032638 | 188322.0 |
| pap2 superfamily protein | SAMN04488090_0748 | Not Available | Negative | 1032710 - 1034020 | 49104.1 |
| fg-gap repeat-containing protein | SAMN04488090_0749 | Not Available | Negative | 1034045 - 1037599 | 130862.0 |
| starch-binding associating with outer membrane | SAMN04488090_0750 | Not Available | Negative | 1037678 - 1039426 | 64134.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_0751 | Not Available | Negative | 1039472 - 1042720 | 118311.0 |
| hypothetical protein | SAMN04488090_0752 | Not Available | Positive | 1043425 - 1044255 | 31104.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
