Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_0733 | Not Available | Negative | 1006990 - 1007703 | 24810.9 |
| hypothetical protein | SAMN04488090_0734 | Not Available | Negative | 1007916 - 1009049 | 42533.9 |
| glutaryl-coa dehydrogenase | SAMN04488090_0735 | Not Available | Positive | 1009184 - 1010362 | 43560.4 |
| repeat domain-containing protein | SAMN04488090_0736 | Not Available | Negative | 1010363 - 1011838 | 54590.9 |
| starch-binding associating with outer membrane | SAMN04488090_0737 | Not Available | Negative | 1011916 - 1013721 | 66464.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_0738 | Not Available | Negative | 1013737 - 1017303 | 129723.0 |
| fecr family protein | SAMN04488090_0739 | Not Available | Negative | 1017567 - 1018625 | 39668.2 |
| rna polymerase sigma factor, sigma-70 family | SAMN04488090_0740 | Not Available | Negative | 1018781 - 1019380 | 24051.8 |
| hypothetical protein | SAMN04488090_0741 | Not Available | Positive | 1020188 - 1020397 | 6889.95 |
| hypothetical protein | SAMN04488090_0742 | Not Available | Positive | 1020749 - 1020997 | 9518.78 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
