Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN04488090_0723 | Not Available | Negative | 992772 - 994634 | 68070.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_0724 | Not Available | Negative | 994659 - 997907 | 118889.0 |
| bile acid:na+ symporter, bass family | SAMN04488090_0725 | Not Available | Negative | 998035 - 999291 | 44949.7 |
| hypothetical protein | SAMN04488090_0726 | Not Available | Negative | 999305 - 1000033 | 27454.2 |
| transcriptional regulator, laci family | SAMN04488090_0727 | Not Available | Positive | 1000552 - 1001586 | 38351.4 |
| signal transduction histidine kinase | SAMN04488090_0728 | Not Available | Negative | 1001683 - 1003038 | 50790.8 |
| two-component system, ompr family, copper resistance phosphate regulon response regulator cusr | SAMN04488090_0729 | Not Available | Negative | 1003044 - 1003721 | 25242.8 |
| hypothetical protein | SAMN04488090_0730 | Not Available | Negative | 1003718 - 1004440 | 26089.6 |
| arsenite efflux membrane protein arsb | SAMN04488090_0731 | Not Available | Negative | 1004490 - 1005731 | 42688.4 |
| predicted arabinose efflux permease, mfs family | SAMN04488090_0732 | Not Available | Negative | 1005739 - 1006965 | 42418.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
