Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_0713 | Not Available | Positive | 975305 - 975505 | 7624.23 |
| arac-type dna-binding protein | SAMN04488090_0714 | Not Available | Negative | 975583 - 976449 | 33201.8 |
| solute:na+ symporter, sss family | SAMN04488090_0715 | Not Available | Positive | 976705 - 978258 | 56489.4 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN04488090_0716 | Not Available | Positive | 978322 - 979299 | 35851.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_0717 | Not Available | Positive | 979850 - 982897 | 111681.0 |
| starch-binding associating with outer membrane | SAMN04488090_0718 | Not Available | Positive | 982943 - 984595 | 61869.9 |
| formylglycine-generating enzyme, required for sulfatase activity, contains sumf1/fge domain | SAMN04488090_0719 | Not Available | Positive | 984677 - 986698 | 74218.2 |
| alpha-galactosidase | SAMN04488090_0720 | Not Available | Negative | 986837 - 988507 | 62223.9 |
| bnr repeat-like domain-containing protein | SAMN04488090_0721 | Not Available | Negative | 988602 - 990359 | 66274.3 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_0722 | Not Available | Negative | 990408 - 992666 | 81892.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
