Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type antimicrobial peptide transport system, permease component | SAMN04488090_0703 | Not Available | Positive | 961400 - 963793 | 89215.3 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_0704 | Not Available | Positive | 964460 - 966406 | 67831.4 |
| pectate lyase superfamily protein | SAMN04488090_0705 | Not Available | Negative | 966552 - 968009 | 52376.3 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_0706 | Not Available | Negative | 968258 - 969157 | 32411.5 |
| hypothetical protein | SAMN04488090_0707 | Not Available | Positive | 969158 - 969363 | 7211.05 |
| peptidase family s41 | SAMN04488090_0708 | Not Available | Positive | 969875 - 971614 | 65413.4 |
| hypothetical protein | SAMN04488090_0709 | Not Available | Positive | 971703 - 971924 | 8588.94 |
| nadph:quinone reductase | SAMN04488090_0710 | Not Available | Negative | 971949 - 972884 | 33554.3 |
| enoyl-coa hydratase/carnithine racemase | SAMN04488090_0711 | Not Available | Negative | 972919 - 973737 | 30497.4 |
| arac-type dna-binding protein | SAMN04488090_0712 | Not Available | Negative | 973830 - 974726 | 34175.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
