Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mcp methyltransferase, cher-type | SAMN04488090_0059 | Not Available | Positive | 80557 - 81372 | 31908.3 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04488090_0060 | Not Available | Negative | 81369 - 81788 | 16051.1 |
| transcriptional regulator, arsr family | SAMN04488090_0061 | Not Available | Negative | 81791 - 82099 | 11872.3 |
| transcriptional regulator, arsr family | SAMN04488090_0062 | Not Available | Positive | 82279 - 82614 | 13099.8 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04488090_0063 | Not Available | Positive | 82598 - 83092 | 19191.7 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04488090_0064 | Not Available | Positive | 83220 - 83636 | 15618.0 |
| signal transduction histidine kinase | SAMN04488090_0065 | Not Available | Negative | 83766 - 87755 | 149437.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_0066 | Not Available | Positive | 88071 - 91373 | 119693.0 |
| starch-binding associating with outer membrane | SAMN04488090_0067 | Not Available | Positive | 91380 - 93179 | 67211.4 |
| glycosyl hydrolases family 16 | SAMN04488090_0068 | Not Available | Positive | 93235 - 94023 | 30418.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
