Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase family, nad-binding rossmann fold | SAMN04488090_0663 | Not Available | Positive | 902813 - 904186 | 51457.7 |
| helix-turn-helix domain-containing protein | SAMN04488090_0664 | Not Available | Positive | 904582 - 904890 | 11691.3 |
| hypothetical protein | SAMN04488090_0665 | Not Available | Positive | 906187 - 911496 | 184848.0 |
| hypothetical protein | SAMN04488090_0666 | Not Available | Negative | 911673 - 912428 | 28304.2 |
| abc-2 type transport system atp-binding protein | SAMN04488090_0667 | Not Available | Negative | 912434 - 913354 | 34275.7 |
| histidine kinase | SAMN04488090_0668 | Not Available | Positive | 913551 - 914570 | 39185.3 |
| two component transcriptional regulator, lyttr family | SAMN04488090_0669 | Not Available | Positive | 914605 - 915312 | 26955.4 |
| two component transcriptional regulator, luxr family | SAMN04488090_0670 | Not Available | Negative | 915459 - 916100 | 23945.0 |
| two component regulator propeller | SAMN04488090_0671 | Not Available | Negative | 916144 - 919179 | 115020.0 |
| hypothetical protein | SAMN04488090_0672 | Not Available | Positive | 919510 - 920298 | 30222.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
