Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heat repeat | SAMN04488090_0652 | Not Available | Negative | 887192 - 890563 | 119682.0 |
| predicted dehydrogenase | SAMN04488090_0653 | Not Available | Negative | 890602 - 891873 | 47300.5 |
| glyoxylase, beta-lactamase superfamily ii | SAMN04488090_0655 | Not Available | Negative | 893633 - 894358 | 27361.7 |
| predicted arabinose efflux permease, mfs family | SAMN04488090_0656 | Not Available | Negative | 894355 - 895542 | 41708.6 |
| lysr family transcriptional regulator, cyn operon transcriptional activator | SAMN04488090_0657 | Not Available | Positive | 895638 - 896516 | 32438.2 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN04488090_0658 | Not Available | Positive | 896698 - 897663 | 35286.5 |
| predicted dehydrogenase | SAMN04488090_0659 | Not Available | Positive | 897880 - 899226 | 49927.4 |
| glucose/galactose transporter | SAMN04488090_0660 | Not Available | Positive | 899411 - 900718 | 48011.0 |
| n-acetylglucosamine-6-phosphate deacetylase | SAMN04488090_0661 | Not Available | Positive | 900725 - 901918 | 43082.6 |
| glucosamine-6-phosphate deaminase | SAMN04488090_0662 | Not Available | Positive | 901929 - 902726 | 29381.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
