Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_0642 | Not Available | Negative | 874812 - 875453 | 23991.3 |
| hypothetical protein | SAMN04488090_0643 | Not Available | Positive | 875567 - 876829 | 46838.9 |
| transcriptional regulator, arsr family | SAMN04488090_0644 | Not Available | Negative | 876807 - 877145 | 12390.1 |
| membrane fusion protein, multidrug efflux system | SAMN04488090_0645 | Not Available | Positive | 877335 - 878441 | 39331.8 |
| multidrug efflux pump | SAMN04488090_0646 | Not Available | Positive | 878457 - 881531 | 112467.0 |
| outer membrane protein tolc | SAMN04488090_0647 | Not Available | Positive | 881528 - 882841 | 48629.2 |
| alpha-l-fucosidase | SAMN04488090_0648 | Not Available | Negative | 882989 - 884461 | 54856.2 |
| hypothetical protein | SAMN04488090_0649 | Not Available | Negative | 884458 - 884613 | 5929.38 |
| hypothetical protein | SAMN04488090_0650 | Not Available | Positive | 884699 - 885820 | 37078.2 |
| hypothetical protein | SAMN04488090_0651 | Not Available | Positive | 886012 - 887124 | 37366.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
