Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enterochelin esterase | SAMN04488090_0632 | Not Available | Negative | 855818 - 856927 | 41021.2 |
| trehalose utilisation | SAMN04488090_0633 | Not Available | Positive | 857099 - 857971 | 32215.4 |
| putative membrane-bound dehydrogenase domain-containing protein | SAMN04488090_0634 | Not Available | Positive | 857975 - 861811 | 142680.0 |
| protein of unknown function | SAMN04488090_0635 | Not Available | Positive | 861958 - 862908 | 34452.2 |
| starch-binding associating with outer membrane | SAMN04488090_0636 | Not Available | Negative | 863104 - 864816 | 64005.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_0637 | Not Available | Negative | 864821 - 868231 | 125480.0 |
| fecr family protein | SAMN04488090_0638 | Not Available | Negative | 868310 - 869290 | 37218.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488090_0639 | Not Available | Negative | 869409 - 870005 | 22551.0 |
| hypothetical protein | SAMN04488090_0640 | Not Available | Negative | 870278 - 870946 | 24516.7 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_0641 | Not Available | Positive | 871566 - 874745 | 114331.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
