Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488090_0622 | Not Available | Positive | 843959 - 844357 | 15279.7 |
| sulfite reductase (ferredoxin) | SAMN04488090_0623 | Not Available | Positive | 844435 - 846540 | 78415.2 |
| sugar phosphate isomerase/epimerase | SAMN04488090_0624 | Not Available | Negative | 846808 - 847644 | 31103.6 |
| quinoprotein glucose dehydrogenase | SAMN04488090_0625 | Not Available | Negative | 847681 - 849885 | 80427.6 |
| arac-type dna-binding protein | SAMN04488090_0626 | Not Available | Positive | 850423 - 851313 | 33661.3 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488090_0627 | Not Available | Negative | 852001 - 852624 | 24535.5 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488090_0628 | Not Available | Positive | 852995 - 853708 | 25288.7 |
| hypothetical protein | SAMN04488090_0629 | Not Available | Negative | 853970 - 854326 | 13573.1 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04488090_0630 | Not Available | Negative | 854937 - 855428 | 18446.5 |
| transcriptional regulator, arsr family | SAMN04488090_0631 | Not Available | Negative | 855425 - 855745 | 12506.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
