Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| condensation domain-containing protein | SAMN04488090_0602 | Not Available | Negative | 807391 - 808668 | 47411.5 |
| glycosyltransferase, mgt family | SAMN04488090_0603 | Not Available | Negative | 808668 - 809858 | 44114.3 |
| glycosyltransferase, mgt family | SAMN04488090_0604 | Not Available | Negative | 809862 - 811049 | 43932.8 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04488090_0605 | Not Available | Negative | 811052 - 811813 | 28903.6 |
| acyl carrier protein | SAMN04488090_0606 | Not Available | Negative | 811801 - 812097 | 11403.5 |
| acyl transferase domain-containing protein | SAMN04488090_0607 | Not Available | Negative | 812082 - 816293 | 153836.0 |
| polyketide-type polyunsaturated fatty acid synthase pfaa | SAMN04488090_0608 | Not Available | Negative | 816300 - 823319 | 253053.0 |
| hypothetical protein | SAMN04488090_0609 | Not Available | Positive | 823434 - 824021 | 22179.0 |
| l-arabinose isomerase | SAMN04488090_0610 | Not Available | Positive | 824392 - 825822 | 52359.4 |
| hypothetical protein | SAMN04488090_0611 | Not Available | Negative | 825851 - 826270 | 16026.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
