Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase family s41 | SAMN04488090_0592 | Not Available | Positive | 793179 - 794453 | 47945.8 |
| predicted metalloprotease, contains c-terminal pdz domain | SAMN04488090_0593 | Not Available | Positive | 794575 - 796350 | 66432.2 |
| putative abc transport system permease protein | SAMN04488090_0594 | Not Available | Positive | 796495 - 798909 | 88685.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_0595 | Not Available | Positive | 799220 - 802432 | 117587.0 |
| starch-binding associating with outer membrane | SAMN04488090_0596 | Not Available | Positive | 802465 - 803928 | 52989.4 |
| hypothetical protein | SAMN04488090_0597 | Not Available | Positive | 804205 - 804792 | 21298.7 |
| hypothetical protein | SAMN04488090_0598 | Not Available | Positive | 804796 - 805026 | 8698.36 |
| hypothetical protein | SAMN04488090_0599 | Not Available | Positive | 805230 - 805655 | 16277.5 |
| hypothetical protein | SAMN04488090_0600 | Not Available | Negative | 805633 - 806151 | 19406.5 |
| uncharacterized protein, contains a nrps condensation (elongation) domain | SAMN04488090_0601 | Not Available | Negative | 806144 - 807394 | 46212.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
