Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative toxin-antitoxin system antitoxin component, tigr02293 family | SAMN04488090_0049 | Not Available | Negative | 66469 - 66864 | 14817.8 |
| hypothetical glycosyl hydrolase 6 | SAMN04488090_0050 | Not Available | Positive | 67010 - 69076 | 77439.7 |
| cubico group peptidase, beta-lactamase class c family | SAMN04488090_0051 | Not Available | Positive | 69193 - 70740 | 56320.2 |
| hypothetical protein | SAMN04488090_0052 | Not Available | Positive | 70895 - 72133 | 46105.1 |
| hypothetical protein | SAMN04488090_0053 | Not Available | Negative | 72130 - 72549 | 15392.2 |
| transcriptional regulator, arac family | SAMN04488090_0054 | Not Available | Positive | 72642 - 73451 | 30091.9 |
| bnr repeat-like domain-containing protein | SAMN04488090_0055 | Not Available | Positive | 73549 - 74772 | 43654.6 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN04488090_0056 | Not Available | Positive | 75064 - 76629 | 59580.4 |
| signal transduction histidine kinase | SAMN04488090_0057 | Not Available | Positive | 76650 - 80189 | 132255.0 |
| response regulator receiver domain-containing protein | SAMN04488090_0058 | Not Available | Positive | 80189 - 80560 | 13402.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
