Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-type dna-binding protein | SAMN04488090_0582 | Not Available | Negative | 776479 - 777363 | 33971.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_0583 | Not Available | Positive | 777566 - 780643 | 113374.0 |
| starch-binding associating with outer membrane | SAMN04488090_0584 | Not Available | Positive | 780651 - 782201 | 58257.2 |
| ectoine hydroxylase-related dioxygenase, phytanoyl-coa dioxygenase (phyh) family | SAMN04488090_0585 | Not Available | Positive | 782222 - 783034 | 30700.3 |
| sugar phosphate isomerase/epimerase | SAMN04488090_0586 | Not Available | Positive | 783031 - 783855 | 31635.6 |
| hypothetical protein | SAMN04488090_0587 | Not Available | Positive | 783866 - 786694 | 106524.0 |
| polygalacturonase | SAMN04488090_0588 | Not Available | Positive | 786713 - 788167 | 53705.1 |
| hypothetical protein | SAMN04488090_0589 | Not Available | Positive | 788175 - 791108 | 109021.0 |
| saccharopine dehydrogenase, nadp-dependent | SAMN04488090_0590 | Not Available | Positive | 791220 - 792233 | 37047.7 |
| hypothetical protein | SAMN04488090_0591 | Not Available | Negative | 792327 - 793013 | 25731.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
