Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488090_0572 | Not Available | Positive | 760291 - 760794 | 19078.5 |
| opacity protein | SAMN04488090_0573 | Not Available | Positive | 760843 - 761430 | 21293.6 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_0574 | Not Available | Positive | 761668 - 766941 | 192789.0 |
| cytochrome c oxidase, cbb3-type, subunit iii | SAMN04488090_0575 | Not Available | Negative | 767004 - 769268 | 82916.1 |
| uncharacterized conserved protein yece, duf72 family | SAMN04488090_0576 | Not Available | Positive | 769569 - 770438 | 33628.7 |
| arylsulfatase a | SAMN04488090_0577 | Not Available | Negative | 770511 - 771929 | 51658.3 |
| alpha-1,2-mannosidase, putative | SAMN04488090_0578 | Not Available | Negative | 772032 - 774317 | 86218.8 |
| carboxypeptidase regulatory-like domain-containing protein | SAMN04488090_0579 | Not Available | Negative | 774460 - 775191 | 26500.2 |
| two component transcriptional regulator, lyttr family | SAMN04488090_0580 | Not Available | Positive | 775352 - 776059 | 26524.2 |
| glyoxalase-like domain-containing protein | SAMN04488090_0581 | Not Available | Negative | 776028 - 776447 | 15404.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
