Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488090_0562 | Not Available | Positive | 747122 - 747721 | 22630.9 |
| gtpase, g3e family | SAMN04488090_0563 | Not Available | Positive | 747802 - 749001 | 45284.7 |
| alkaline phosphatase | SAMN04488090_0564 | Not Available | Positive | 749066 - 750445 | 50281.9 |
| transcriptional regulator, arac family | SAMN04488090_0565 | Not Available | Negative | 750543 - 751397 | 32473.0 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN04488090_0566 | Not Available | Positive | 751528 - 752439 | 32806.9 |
| proline racemase | SAMN04488090_0567 | Not Available | Positive | 752439 - 753443 | 36678.8 |
| d-amino-acid dehydrogenase | SAMN04488090_0568 | Not Available | Positive | 753440 - 754675 | 44392.4 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN04488090_0569 | Not Available | Positive | 754719 - 756938 | 83503.0 |
| protein of unknown function | SAMN04488090_0570 | Not Available | Positive | 756935 - 758611 | 64806.4 |
| amino acid/polyamine/organocation transporter, apc superfamily | SAMN04488090_0571 | Not Available | Positive | 758673 - 760097 | 51016.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
