Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-type dna-binding protein | SAMN04488090_0552 | Not Available | Negative | 739870 - 740694 | 30857.0 |
| methyltransferase, fkbm family | SAMN04488090_0553 | Not Available | Negative | 740728 - 741516 | 30550.8 |
| polyisoprenoid-binding protein ycei | SAMN04488090_0554 | Not Available | Negative | 741568 - 742071 | 18681.5 |
| type i phosphodiesterase / nucleotide pyrophosphatase | SAMN04488090_0555 | Not Available | Negative | 742165 - 743043 | 32103.6 |
| gntr family transcriptional regulator / mocr family aminotransferase | SAMN04488090_0556 | Not Available | Negative | 743117 - 744577 | 53973.4 |
| cupin domain-containing protein | SAMN04488090_0557 | Not Available | Positive | 744669 - 745121 | 17511.6 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN04488090_0558 | Not Available | Positive | 745140 - 746030 | 32430.3 |
| hypothetical protein | SAMN04488090_0559 | Not Available | Positive | 746142 - 746585 | 16826.4 |
| hypothetical protein | SAMN04488090_0560 | Not Available | Negative | 746551 - 746766 | 7844.45 |
| hypothetical protein | SAMN04488090_0561 | Not Available | Positive | 746848 - 747075 | 8099.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
