Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488090_0532 | Not Available | Positive | 716839 - 717438 | 23545.1 |
| fecr family protein | SAMN04488090_0533 | Not Available | Positive | 717512 - 718579 | 40006.2 |
| iron complex outermembrane recepter protein | SAMN04488090_0534 | Not Available | Positive | 718740 - 722078 | 120934.0 |
| starch-binding associating with outer membrane | SAMN04488090_0535 | Not Available | Positive | 722093 - 723706 | 60436.5 |
| hypothetical protein | SAMN04488090_0536 | Not Available | Negative | 723758 - 725629 | 69965.9 |
| rna polymerase sigma factor, sigma-70 family | SAMN04488090_0537 | Not Available | Positive | 725853 - 726452 | 22894.9 |
| hypothetical protein | SAMN04488090_0538 | Not Available | Positive | 726455 - 727111 | 24204.9 |
| papain family cysteine protease | SAMN04488090_0539 | Not Available | Positive | 727111 - 727938 | 30552.5 |
| hypothetical protein | SAMN04488090_0540 | Not Available | Negative | 727942 - 728451 | 18198.9 |
| protein of unknown function | SAMN04488090_0541 | Not Available | Negative | 728521 - 729939 | 53503.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
